cellmaps_ppidownloader
Contents:
Installation
Usage
Inputs
Outputs
Reference
Developer Topics
Credits
History
cellmaps_ppidownloader
Index
Index
A
|
B
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C
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E
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G
|
M
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Q
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R
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S
A
add_geneids_to_set() (cellmaps_ppidownloader.gene.GeneNodeAttributeGenerator static method)
APMSGeneNodeAttributeGenerator (class in cellmaps_ppidownloader.gene)
B
BAITLIST_FILEKEY (cellmaps_ppidownloader.runner.CellmapsPPIDownloader attribute)
BAITLIST_GENE_ID (cellmaps_ppidownloader.gene.APMSGeneNodeAttributeGenerator attribute)
BAITLIST_GENE_SYMBOL (cellmaps_ppidownloader.gene.APMSGeneNodeAttributeGenerator attribute)
BAITLIST_NUM_INTERACTORS (cellmaps_ppidownloader.gene.APMSGeneNodeAttributeGenerator attribute)
C
cellmaps_ppidownloader
module
cellmaps_ppidownloader.cellmaps_ppidownloadercmd
module
cellmaps_ppidownloader.exceptions
module
cellmaps_ppidownloader.gene
module
cellmaps_ppidownloader.runner
module
CellmapsPPIDownloader (class in cellmaps_ppidownloader.runner)
CellMapsPPIDownloaderError
CM4AI_ROCRATE (cellmaps_ppidownloader.runner.CellmapsPPIDownloader attribute)
CM4AIGeneNodeAttributeGenerator (class in cellmaps_ppidownloader.gene)
E
EDGELIST_FILEKEY (cellmaps_ppidownloader.runner.CellmapsPPIDownloader attribute)
G
GENEID_COL1 (cellmaps_ppidownloader.gene.APMSGeneNodeAttributeGenerator attribute)
GENEID_COL2 (cellmaps_ppidownloader.gene.APMSGeneNodeAttributeGenerator attribute)
GeneNodeAttributeGenerator (class in cellmaps_ppidownloader.gene)
GeneQuery (class in cellmaps_ppidownloader.gene)
generate_readme() (cellmaps_ppidownloader.runner.CellmapsPPIDownloader method)
get_apms_baitlist_from_tsvfile() (cellmaps_ppidownloader.gene.APMSGeneNodeAttributeGenerator static method)
get_apms_edgelist() (cellmaps_ppidownloader.gene.APMSGeneNodeAttributeGenerator method)
(cellmaps_ppidownloader.gene.CM4AIGeneNodeAttributeGenerator method)
get_apms_edgelist_from_tsvfile() (cellmaps_ppidownloader.gene.APMSGeneNodeAttributeGenerator static method)
(cellmaps_ppidownloader.gene.CM4AIGeneNodeAttributeGenerator static method)
get_example_provenance() (cellmaps_ppidownloader.runner.CellmapsPPIDownloader static method)
get_gene_node_attributes() (cellmaps_ppidownloader.gene.APMSGeneNodeAttributeGenerator method)
(cellmaps_ppidownloader.gene.CM4AIGeneNodeAttributeGenerator method)
(cellmaps_ppidownloader.gene.GeneNodeAttributeGenerator method)
get_ppi_edgelist_file() (cellmaps_ppidownloader.runner.CellmapsPPIDownloader method)
get_ppi_gene_node_attributes_file() (cellmaps_ppidownloader.runner.CellmapsPPIDownloader method)
get_ppi_gene_node_errors_file() (cellmaps_ppidownloader.runner.CellmapsPPIDownloader method)
get_symbols_for_genes() (cellmaps_ppidownloader.gene.GeneQuery method)
M
main() (in module cellmaps_ppidownloader.cellmaps_ppidownloadercmd)
module
cellmaps_ppidownloader
cellmaps_ppidownloader.cellmaps_ppidownloadercmd
cellmaps_ppidownloader.exceptions
cellmaps_ppidownloader.gene
cellmaps_ppidownloader.runner
Q
querymany() (cellmaps_ppidownloader.gene.GeneQuery method)
R
run() (cellmaps_ppidownloader.runner.CellmapsPPIDownloader method)
S
SYMBOL_COL1 (cellmaps_ppidownloader.gene.APMSGeneNodeAttributeGenerator attribute)
SYMBOL_COL2 (cellmaps_ppidownloader.gene.APMSGeneNodeAttributeGenerator attribute)